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Search Results - genomics

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catRAPID: large-scale sequence-based prediction of protein–RNA interactions
catRAPID estimates the binding propensity of protein-RNA pairs by using sequence information only. The algorithm can be used to predict protein associations with coding and non-coding transcripts. Predictions have proved very accurate (> 0.8) when validated by traditional Immunoprecipitation methods, like RIP and CLIP.Applications and Services:I...
Published: 09/03/2016   |   Inventor(s): Gian Gaetano Tartaglia, Federico Agostini, Davide Cirillo, Petr Klus
Keywords(s): Algorithms, Bioinformatics, Biomarkers, Genomics, Protein Structure & Design, Software
Category(s): Software & Algorithms
Method to identify new cancer drug targets in spliceosomal components
A new method and tools to map functional interactions of spliceosomal components accurately captures known, and identify new physical and functional associations important for health and disease.The method can be used to infer targets for alternative splicing regulation, and to study the effects on splicing of compounds directed to altered, or dise...
Published: 12/02/2016   |   Inventor(s): Juan Valcarcel, Juan Tejedor, Panagiotis Papasaikas
Keywords(s): Algorithms, Bioinformatics, Genomics, Oncology
Category(s): Methodology, General Biology & Chemistry, Software & Algorithms

 

 

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